STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010494HORMA domain containing 1. (314 aa)    
Predicted Functional Partners:
ENSCHAP00000060454
DNA meiotic recombinase 1.
   
 
 0.689
ENSCHAP00000028645
Thyroid hormone receptor interactor 13.
   
 
 0.624
rad51
RAD51 recombinase.
   
 
 0.609
ENSCHAP00000003831
RAD51 paralog C.
   
 
 0.549
ENSCHAP00000023187
annotation not available
   
 
 0.549
ENSCHAP00000006175
Structural maintenance of chromosomes 3.
    
 
 0.546
ENSCHAP00000050616
SPO11 initiator of meiotic double stranded breaks.
   
  
 0.533
ENSCHAP00000038704
Meiotic nuclear divisions 1 homolog (S. cerevisiae).
    
 
 0.530
ENSCHAP00000054339
annotation not available
      
 0.522
ENSCHAP00000050611
Testis expressed 11.
   
 
 0.518
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.