STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010505Excision repair cross-complementation group 4. (901 aa)    
Predicted Functional Partners:
ENSCHAP00000001476
annotation not available
   
 0.999
ENSCHAP00000035080
Xeroderma pigmentosum, complementation group A.
    
 0.997
ENSCHAP00000024514
WRN RecQ like helicase.
   
 0.987
ENSCHAP00000026628
annotation not available
  
 0.987
ENSCHAP00000026655
annotation not available
  
 0.987
ENSCHAP00000056281
FA complementation group F.
    
 0.987
fancl
FA complementation group L.
    
 0.986
ENSCHAP00000041952
FA complementation group G.
    
 0.985
ENSCHAP00000061364
FA complementation group B.
   
 0.985
ENSCHAP00000057806
DNA topoisomerase III beta.
    
 0.984
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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