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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010553Cathepsin S, ortholog2, tandem duplicate 1. (365 aa)    
Predicted Functional Partners:
ENSCHAP00000025348
annotation not available
     
 0.829
ENSCHAP00000030175
BCL2 like 1.
     
 0.824
LOC105891347
Apoptosis regulator Bcl-2-like.
   
 
 0.821
ENSCHAP00000048322
X-linked inhibitor of apoptosis.
     
 0.820
birc2
Baculoviral IAP repeat containing 2.
     
 0.816
LOC105897314
Baculoviral IAP repeat-containing protein 5.1-like.
     
 0.812
rps14
Ribosomal protein S14.
   
 0.689
ENSCHAP00000047683
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
 0.689
ENSCHAP00000012516
Cathepsin H.
  
 
0.681
LOC105908958
Baculoviral IAP repeat-containing protein 5.2-A-like.
     
 0.679
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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