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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIF5Eukaryotic translation initiation factor 5. (525 aa)    
Predicted Functional Partners:
ENSCHAP00000008683
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 0.996
ENSCHAP00000001034
Eukaryotic translation initiation factor 3, subunit C.
   
 0.986
eif2s1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.985
eif2s2
Eukaryotic translation initiation factor 2 subunit beta.
   
0.982
eif2s3
Eukaryotic translation initiation factor 2 subunit gamma.
   
 0.981
eif3g
Eukaryotic translation initiation factor 3 subunit G.
   
 0.981
ENSCHAP00000038186
Eukaryotic translation initiation factor 3, subunit 10 (theta).
   
 0.981
eif3i
Eukaryotic translation initiation factor 3 subunit I.
   
 0.981
ENSCHAP00000018110
annotation not available
  
 0.980
rps3
Ribosomal protein S3.
   
 0.965
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.