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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105905811Platelet-derived growth factor subunit A-like. (197 aa)    
Predicted Functional Partners:
ENSCHAP00000010756
Platelet-derived growth factor receptor, alpha polypeptide.
    
 0.958
ENSCHAP00000013052
Platelet-derived growth factor beta polypeptide a.
    
0.924
ENSCHAP00000016862
Platelet-derived growth factor beta polypeptide b.
    
0.923
ENSCHAP00000017905
Platelet derived growth factor c.
     
 0.922
ENSCHAP00000046980
annotation not available
    
 0.916
ENSCHAP00000047049
Platelet-derived growth factor receptor, beta polypeptide.
    
 0.916
ENSCHAP00000049802
annotation not available
     
 0.911
ENSCHAP00000006669
Fms-related tyrosine kinase 4.
    
 0.908
ENSCHAP00000022623
Kinase insert domain receptor (a type III receptor tyrosine kinase).
    
 0.908
ENSCHAP00000035307
annotation not available
    
 0.908
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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