STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010607Zgc:162324. (662 aa)    
Predicted Functional Partners:
pacrg
Parkin coregulated.
    
 
 0.906
ENSCHAP00000028636
Enkurin, TRPC channel interacting protein.
    
 
 0.884
efhc2
EF-hand domain containing 2.
    
 
 0.824
efhc1
EF-hand domain containing 1.
    
 
 0.824
ENSCHAP00000034720
Cilia and flagella associated protein 126.
    
   0.733
ENSCHAP00000043243
Si:ch211-226m7.4.
    
   0.733
LOC105893651
Chromosome unknown open reading frame, human C1orf194.
    
   0.733
C9orf135
Chromosome 9 open reading frame 135.
    
   0.733
ENSCHAP00000057468
Sperm associated antigen 8.
    
   0.733
HGFAC
HGF activator.
    
 
 0.664
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.