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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010610Si:ch211-212o1.2. (296 aa)    
Predicted Functional Partners:
ENSCHAP00000000456
annotation not available
 
  
  0.956
ube2v2
Ubiquitin conjugating enzyme E2 V2.
 
  
  0.895
ENSCHAP00000030857
annotation not available
    
 0.889
ENSCHAP00000055981
Transmembrane protein 189.
  
  
 
0.851
ENSCHAP00000008802
Choline/ethanolamine phosphotransferase 1b.
     
 0.850
LOC105906821
Choline/ethanolaminephosphotransferase 1-like.
     
 0.850
ENSCHAP00000022381
Ubiquitin-conjugating enzyme E2 variant 1.
 
  
  0.850
ENSCHAP00000055050
Selenoprotein I.
     
 0.850
ENSCHAP00000027818
Zgc:92162.
     
 0.847
ENSCHAP00000042329
annotation not available
     
 0.824
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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