STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10589052515-hydroxyprostaglandin dehydrogenase [NAD(+)]-like. (266 aa)    
Predicted Functional Partners:
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
0.870
ptges
Prostaglandin E synthase.
     
 0.855
aldh7a1
Aldehyde dehydrogenase 7 family member A1.
  
 0.854
echs1
enoyl-CoA hydratase, short chain 1.
   
 0.853
dhrs1
Dehydrogenase/reductase 1.
  
  
0.851
ENSCHAP00000043162
3-hydroxyisobutyryl-CoA hydrolase.
   
 0.848
acox3
acyl-CoA oxidase 3, pristanoyl.
  
 0.836
aacs
acetoacetyl-CoA synthetase.
    
 0.834
ENSCHAP00000048853
Microsomal glutathione S-transferase 1.1.
     
 0.813
ENSCHAP00000004516
annotation not available
   
 0.801
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.