STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010683beta-1,4-N-acetyl-galactosaminyl transferase 4b. (1128 aa)    
Predicted Functional Partners:
ENSCHAP00000007380
Carbohydrate sulfotransferase 8.
     
 0.866
ENSCHAP00000044225
beta-1,4-N-acetyl-galactosaminyl transferase 3b.
  
  
 
0.855
ENSCHAP00000034799
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3.
     
 0.850
LOC105891829
Beta-1,4-galactosyltransferase 3-like.
     
 0.850
ENSCHAP00000035555
beta-1,4-N-acetyl-galactosaminyl transferase 4a.
  
  
 
0.850
ENSCHAP00000048888
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2.
     
 0.850
ENSCHAP00000007944
Fucosyltransferase 8b (alpha (1,6) fucosyltransferase).
    
  0.849
ENSCHAP00000014046
Fucosyltransferase 8a (alpha (1,6) fucosyltransferase).
    
  0.849
ENSCHAP00000003145
Chondroitin polymerizing factor b.
    
 0.670
ENSCHAP00000056233
Chondroitin polymerizing factor a.
    
 0.670
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.