STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105904600Apolipoprotein O-like. (207 aa)    
Predicted Functional Partners:
ENSCHAP00000051683
Inner membrane protein, mitochondrial (mitofilin).
    
 0.983
ENSCHAP00000047728
annotation not available
   
 0.979
ENSCHAP00000048549
Coiled-coil-helix-coiled-coil-helix domain containing 3a.
   
 0.978
micos13
Mitochondrial contact site and cristae organizing system subunit 13.
   
 0.971
LOC105894309
dnaJ homolog subfamily C member 11-like.
    
 0.969
APOOL
Apolipoprotein O like.
  
 
0.930
ENSCHAP00000043803
Apolipoprotein O-like.
    
0.926
ENSCHAP00000018953
DnaJ (Hsp40) homolog, subfamily C, member 11b.
    
 0.908
micos10
Mitochondrial contact site and cristae organizing system subunit 10.
   
 
 0.900
ENSCHAP00000057542
Mitochondrial contact site and cristae organizing system subunit 10.
   
 
 0.900
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.