STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010700annotation not available (150 aa)    
Predicted Functional Partners:
ENSCHAP00000024071
Syntaxin 5A.
   
 0.930
gosr1
Golgi SNAP receptor complex member 1.
    
 0.930
LOC105900350
Syntaxin-5-like.
   
 0.930
uso1
USO1 vesicle transport factor.
   
 0.872
ENSCHAP00000024578
Golgi reassembly stacking protein 2.
    
 0.827
ENSCHAP00000028843
Golgi reassembly stacking protein 1b.
    
 0.827
ENSCHAP00000055826
Golgi reassembly stacking protein 1a.
    
 0.827
bet1
Bet1 golgi vesicular membrane trafficking protein.
    
 0.711
ENSCHAP00000049098
Lectin, mannose-binding, 1.
   
 
 0.710
gosr2
Golgi SNAP receptor complex member 2.
     
 0.706
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.