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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jak1Janus kinase 1. (1191 aa)    
Predicted Functional Partners:
ENSCHAP00000016391
Macrophage stimulating 1 receptor b.
    
 0.727
ENSCHAP00000041906
Macrophage stimulating 1 receptor a.
    
0.727
ENSCHAP00000053649
MET proto-oncogene, receptor tyrosine kinase.
    
0.727
ENSCHAP00000015638
Phosphoprotein membrane anchor with glycosphingolipid microdomains 1.
    
 0.675
ENSCHAP00000016490
Intersectin 2b.
   
 0.671
ENSCHAP00000057857
Intersectin 2a.
   
 0.671
ENSCHAP00000039433
Inositol polyphosphate phosphatase-like 1b.
    
  0.670
traf7
TNF receptor associated factor 7.
    
 0.664
ENSCHAP00000013182
Leptin receptor.
    
 0.663
ENSCHAP00000061282
annotation not available
   
 0.663
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.