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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010756Platelet-derived growth factor receptor, alpha polypeptide. (1475 aa)    
Predicted Functional Partners:
ENSCHAP00000017905
Platelet derived growth factor c.
    
 0.966
ENSCHAP00000014803
annotation not available
    
 0.963
ENSCHAP00000013052
Platelet-derived growth factor beta polypeptide a.
   
 0.960
LOC105905811
Platelet-derived growth factor subunit A-like.
    
 0.958
ENSCHAP00000016862
Platelet-derived growth factor beta polypeptide b.
   
 0.954
ENSCHAP00000002352
Platelet-derived growth factor alpha polypeptide b.
    
 0.952
ENSCHAP00000049882
Kit ligand a.
    
 0.946
vegfc
Vascular endothelial growth factor C.
    
 0.944
ENSCHAP00000037694
annotation not available
    
 0.942
ENSCHAP00000037985
Ribosomal protein L13a.
    
 0.942
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.