STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010783annotation not available (119 aa)    
Predicted Functional Partners:
ENSCHAP00000009160
RAN binding protein 2.
   
 0.993
sae1
SUMO1 activating enzyme subunit 1.
   
 0.971
uba2
Ubiquitin like modifier activating enzyme 2.
   
 0.966
ube2i
Ubiquitin conjugating enzyme E2 I.
   
 0.963
pcna
Proliferating cell nuclear antigen.
   
 0.958
LOC105890774
SUMO-conjugating enzyme UBC9-like.
   
 0.942
ENSCHAP00000020098
Protein inhibitor of activated STAT, 4b.
    
 0.938
senp2
SUMO specific peptidase 2.
   
 0.927
ENSCHAP00000059740
Si:dkey-21c19.3.
   
 0.927
ENSCHAP00000007825
NEDD8 ubiquitin like modifier, like.
   
 0.922
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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