STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpmCarboxypeptidase M. (443 aa)    
Predicted Functional Partners:
ENSCHAP00000060131
Cyclin G associated kinase.
    
  0.982
ENSCHAP00000009106
Adaptor related protein complex 1 subunit gamma 2.
   
 
 0.554
ENSCHAP00000031837
Insulin-like growth factor 2 receptor.
     
 0.554
ENSCHAP00000037904
Sortilin 1b.
     
 0.545
yeats4
YEATS domain containing 4.
      
 0.539
ENSCHAP00000037010
Adaptor related protein complex 4 subunit epsilon 1.
   
 
  0.506
ENSCHAP00000055664
Prolyl endopeptidase.
      
 0.457
ap4m1
Adaptor related protein complex 4 subunit mu 1.
    
  0.452
LOC105910163
AP-1 complex subunit mu-2.
    
  0.452
ENSCHAP00000061275
Adaptor related protein complex 1 subunit mu 3.
    
  0.452
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.