STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010856annotation not available (563 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.864
ENSCHAP00000059679
Actin related protein 5.
    
 0.821
ENSCHAP00000001736
Nuclear factor related to kappaB binding protein.
    
 0.815
mcrs1
Microspherule protein 1.
    
  0.805
ino80
INO80 complex ATPase subunit.
    
  0.798
tfpt
TCF3 fusion partner.
   
 0.797
ino80c
INO80 complex subunit C.
    
 0.779
ENSCHAP00000054960
Actin related protein 8.
    
 0.775
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.764
ruvbl1
RuvB like AAA ATPase 1.
    
  0.762
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.