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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105907686Chromobox protein homolog 3-like. (188 aa)    
Predicted Functional Partners:
LOC105893664
Histone-lysine N-methyltransferase SUV39H1-like.
   
 0.965
suv39h1
Suppressor of variegation 3-9 homolog 1.
   
0.965
ENSCHAP00000019328
L3MBTL histone methyl-lysine binding protein 2.
    
 0.896
ENSCHAP00000038384
annotation not available
    
 0.888
ENSCHAP00000017787
Chromatin assembly factor 1, subunit A (p150).
   
 
 0.882
ENSCHAP00000031961
Euchromatic histone-lysine N-methyltransferase 2.
    
 0.881
LOC105890033
Histone-lysine N-methyltransferase EHMT1-like.
    
 0.881
ehmt1
Euchromatic histone lysine methyltransferase 1.
    
 0.881
ENSCHAP00000021128
EMSY transcriptional repressor, BRCA2 interacting.
    
 
 0.877
ENSCHAP00000058145
Si:ch211-195d17.2.
   
 0.873
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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