STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105907879Heat shock protein 30-like. (259 aa)    
Predicted Functional Partners:
ENSCHAP00000010106
BCL2 associated athanogene 5.
    
 0.584
bag4
BCL2 associated athanogene 4.
    
 0.584
ENSCHAP00000017391
MAPK activated protein kinase 5.
    
 0.582
MAPKAPK2
MAPK activated protein kinase 2.
    
 0.582
ENSCHAP00000053449
MAPK activated protein kinase 2b.
    
 0.582
bag2
BCL2 associated athanogene 2.
    
 0.545
hspb3
Heat shock protein family B (small) member 3.
      
 0.521
ENSCHAP00000000594
Heat shock protein, alpha-crystallin-related, b2.
      
 0.520
ENSCHAP00000039311
RNA polymerase II associated protein 3.
    
  0.451
ENSCHAP00000020723
Protein phosphatase 5, catalytic subunit.
     
 0.447
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.