STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010905annotation not available (1646 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.864
ENSCHAP00000010783
annotation not available
    
 0.793
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.764
ENSCHAP00000009160
RAN binding protein 2.
   
 0.750
ENSCHAP00000018131
Small ubiquitin like modifier 2b.
    
 0.739
LOC105901964
Small ubiquitin-related modifier 2-like.
    
 0.739
ENSCHAP00000051067
Small ubiquitin like modifier 3a.
    
 0.725
SUMO1
Small ubiquitin-related modifier 1-like.
    
 0.708
ENSCHAP00000047368
Lysine (K)-specific demethylase 6A.
   
 0.643
ppil6
Peptidylprolyl isomerase like 6.
    
  0.625
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.