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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105891023Inositol 1,4,5-trisphosphate receptor-interacting protein-like. (712 aa)    
Predicted Functional Partners:
coq9
Coenzyme Q9.
   
 0.941
coq3
Coenzyme Q3, methyltransferase.
  
 0.858
ENSCHAP00000001713
Coenzyme Q4 homolog (S. cerevisiae).
    
 0.831
ENSCHAP00000007991
Coenzyme Q5, methyltransferase.
   
 0.831
ENSCHAP00000028893
Coenzyme Q6 monooxygenase.
   
 0.816
ENSCHAP00000005887
Squalene epoxidase b.
    
 0.608
sqle
Squalene epoxidase.
    
 0.608
ENSCHAP00000050025
Kynurenine 3-monooxygenase.
    
 0.608
ENSCHAP00000018451
Coenzyme Q8A, genome duplicate a.
   
 
 0.491
LOC105895731
Atypical kinase ADCK3, mitochondrial-like.
   
 
 0.491
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.