STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000010935M-phase phosphoprotein 8. (980 aa)    
Predicted Functional Partners:
rb1
RB transcriptional corepressor 1.
   
 0.944
ENSCHAP00000052975
Retinoblastoma-like 1 (p107).
   
 0.944
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.937
LOC105899433
NAD-dependent protein deacylase sirtuin-5, mitochondrial-like.
    
 0.880
ENSCHAP00000038384
annotation not available
    
 0.880
sirt5
Sirtuin 5.
    
 0.880
ENSCHAP00000025068
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
    
 0.875
ENSCHAP00000030235
SET domain containing 7, histone lysine methyltransferase.
    
 0.875
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
    
 0.875
LOC105893664
Histone-lysine N-methyltransferase SUV39H1-like.
    
 0.844
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.