STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trim32Tripartite motif containing 32. (671 aa)    
Predicted Functional Partners:
ENSCHAP00000015688
Stimulator of interferon response cGAMP interactor 1.
    
 0.865
rps27a
Ribosomal protein S27a.
    
  0.761
UBE2N
Ubiquitin conjugating enzyme E2 N.
    
 0.748
ube2n
Ubiquitin conjugating enzyme E2 N.
    
 0.748
ENSCHAP00000030291
Ubiquitin B.
    
 0.731
ENSCHAP00000003537
Abl-interactor 2a.
    
 
 0.715
ENSCHAP00000003253
annotation not available
    
   0.595
LOC105895300
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like.
    
   0.595
ENSCHAP00000015295
annotation not available
    
   0.595
ENSCHAP00000000278
Si:dkey-219c10.4.
    
   0.571
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.