STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011103annotation not available (264 aa)    
Predicted Functional Partners:
psap
Prosaposin.
  
  
 
0.859
ENSCHAP00000017562
Glucosidase, beta, acid.
    
 0.716
ENSCHAP00000047689
Transmembrane protein 130.
    
 0.716
LOC105899436
Galactocerebrosidase-like.
    
 
 0.662
ENSCHAP00000043860
Galactosylceramidase b.
    
 
 0.662
LOC105906309
Ras-related GTP-binding protein A.
     
 0.529
ENSCHAP00000011363
annotation not available
   
 
  0.526
LOC105905810
Neuropeptide B-like.
   
 
  0.526
ENSCHAP00000051526
ATPase, H+ transporting, lysosomal, V1 subunit B, member a.
   
 
  0.501
ENSCHAP00000060460
ATPase H+ transporting V1 subunit B2.
   
 
  0.501
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.