STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011105annotation not available (448 aa)    
Predicted Functional Partners:
ENSCHAP00000040398
Interleukin-1 receptor-associated kinase 4.
    
 0.871
ENSCHAP00000000456
annotation not available
    
 0.864
ENSCHAP00000015917
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
 0.753
ENSCHAP00000033351
TNF receptor-associated factor 6.
   
 0.752
TRAF6
TNF receptor-associated factor 6-like.
   
 0.752
ENSCHAP00000024060
annotation not available
    
 0.720
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.679
UBE2N
Ubiquitin conjugating enzyme E2 N.
    
 0.673
ube2n
Ubiquitin conjugating enzyme E2 N.
    
 0.673
ube2v2
Ubiquitin conjugating enzyme E2 V2.
    
 0.631
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.