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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gadd45gip1GADD45G interacting protein 1. (231 aa)    
Predicted Functional Partners:
ENSCHAP00000019274
Mitochondrial ribosomal protein L40.
   
 
 0.983
ENSCHAP00000013591
Mitochondrial ribosomal protein L11.
   
 
 0.982
ENSCHAP00000020721
Mitochondrial ribosomal protein L41.
   
 
 0.975
mrpl58
Mitochondrial ribosomal protein L58.
   
 
 0.974
ENSCHAP00000048732
Mitochondrial ribosomal protein L36.
   
   0.972
mrpl16
Mitochondrial ribosomal protein L16.
   
 0.970
ENSCHAP00000002735
Mitochondrial ribosomal protein L30.
   
 
 0.969
mrpl28
Mitochondrial ribosomal protein L28.
   
   0.967
mrpl24
Mitochondrial ribosomal protein L24.
   
   0.966
ENSCHAP00000010615
Mitochondrial ribosomal protein L4.
   
   0.964
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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