STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011143Septin 9a. (628 aa)    
Predicted Functional Partners:
ENSCHAP00000040034
Septin 15.
  
 
0.859
SEPTIN7
Septin 7.
  
 
0.857
LOC105898825
septin-2B.
  
 
0.842
LOC105898461
Septin-2.
  
 
0.841
LOC105911973
Septin-11-like.
  
0.821
ENSCHAP00000045587
Septin 6.
  
0.806
LOC105900397
septin-8-A.
  
0.804
ENSCHAP00000045754
annotation not available
  
 
0.755
LOC105913293
Septin-5.
  
 
0.752
ENSCHAP00000040409
annotation not available
  
 
0.750
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.