STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
elp5Elongator acetyltransferase complex subunit 5. (294 aa)    
Predicted Functional Partners:
elp4
Elongator acetyltransferase complex subunit 4.
   
 0.999
elp3
Elongator acetyltransferase complex subunit 3.
   
 0.998
ENSCHAP00000054070
Elongator complex protein 1.
   
 0.998
elp6
Elongator acetyltransferase complex subunit 6.
    
 0.994
ENSCHAP00000028504
Elongator acetyltransferase complex subunit 2.
    
 0.972
kti12
KTI12 chromatin associated homolog.
   
 
 0.894
ctu1
Cytosolic thiouridylase subunit 1.
   
 
 0.749
PIPOX
Pipecolic acid and sarcosine oxidase.
    
 
 0.734
ENSCHAP00000057273
Pipecolic acid oxidase.
    
 
 0.734
ENSCHAP00000056195
WD repeat domain 18.
   
 0.658
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.