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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011185annotation not available (220 aa)    
Predicted Functional Partners:
ENSCHAP00000036037
Tonsoku-like, DNA repair protein.
    
 0.959
ENSCHAP00000012069
MMS22-like, DNA repair protein.
 
     0.942
mcm8
Minichromosome maintenance 8 homologous recombination repair factor.
   
 0.906
ENSCHAP00000031246
Minichromosome maintenance 9 homologous recombination repair factor.
   
 0.906
ENSCHAP00000045149
Minichromosome maintenance complex component 6.
   
 0.906
supt16h
SPT16 homolog, facilitates chromatin remodeling subunit.
    
  0.893
ENSCHAP00000016196
Minichromosome maintenance complex component 7.
   
 0.886
mcm5
Minichromosome maintenance complex component 5.
   
 
 0.879
ENSCHAP00000023162
Minichromosome maintenance complex component 4.
   
 0.876
LOC105906971
Maternal DNA replication licensing factor mcm6-like.
   
 0.853
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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