STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011197ER degradation enhancer, mannosidase alpha-like 3. (911 aa)    
Predicted Functional Partners:
edem2
ER degradation enhancing alpha-mannosidase like protein 2.
  
 
0.895
ENSCHAP00000054409
Si:ch211-282j22.3.
  
  
 
0.850
ENSCHAP00000014943
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 
 0.666
ENSCHAP00000010298
Transient receptor potential cation channel, subfamily C, member 4 associated protein a.
 
   
  0.521
ENSCHAP00000010669
Transient receptor potential cation channel, subfamily C, member 4 associated protein b.
 
   
  0.521
ENSCHAP00000023514
Si:dkey-24p1.6.
   
 
 0.511
ENSCHAP00000047463
annotation not available
   
 
 0.511
ENSCHAP00000028386
Thioredoxin domain containing 11.
    
 
 0.501
rpn1
Ribophorin I.
    
 
 0.500
ENSCHAP00000038625
OS9 endoplasmic reticulum lectin.
    
 
 0.498
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.