STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011211annotation not available (185 aa)    
Predicted Functional Partners:
ENSCHAP00000011963
Apoptotic peptidase activating factor 1.
   
 0.998
LOC105889141
Cytochrome b-c1 complex subunit Rieske, mitochondrial-like.
  
 0.986
ENSCHAP00000057000
annotation not available
  
 0.986
LOC105905342
Cytochrome b-c1 complex subunit 7.
   
 0.984
ENSCHAP00000027020
annotation not available
  
 0.982
LOC105897947
Cytochrome c1, heme protein, mitochondrial-like.
  
 0.982
suox
Sulfite oxidase.
  
 0.979
ENSCHAP00000060416
Ubiquinol-cytochrome c reductase, complex III subunit X.
   
 0.976
LOC105904295
Cytochrome b-c1 complex subunit 8.
   
 0.972
ENSCHAP00000050341
annotation not available
   
 0.969
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.