STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011307Protein-glucosylgalactosylhydroxylysine glucosidase. (702 aa)    
Predicted Functional Partners:
ENSCHAP00000027745
Pseudouridine 5'-phosphatase.
  
 
 0.959
yipf6
Yip1 domain family member 6.
  
 0.957
ENSCHAP00000054461
Trehalase (brush-border membrane glycoprotein).
  
 0.956
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
    
 0.919
gbe1
1,4-alpha-glucan branching enzyme 1.
  
 
 0.911
ENSCHAP00000046300
Glucan (1,4-alpha-), branching enzyme 1a.
  
 
 0.911
galm
Galactose mutarotase.
  
 
 0.908
ENSCHAP00000014065
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.
  
 
 0.906
fuca2
alpha-L-fucosidase 2.
    
 0.828
fuca1
alpha-L-fucosidase 1.
    
 0.828
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.