STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011318annotation not available (665 aa)    
Predicted Functional Partners:
LOC105903293
Docosahexaenoic acid omega-hydroxylase CYP4F3-like.
   
 0.878
ENSCHAP00000057220
Prostaglandin-endoperoxide synthase 1.
   
 
 0.866
ENSCHAP00000033249
Prostaglandin-endoperoxide synthase 2b.
   
 
 0.865
alox5
Arachidonate 5-lipoxygenase.
  
  
 
0.858
ENSCHAP00000058276
Arachidonate 12-lipoxygenase.
  
  
 
0.857
pla2g4a
Phospholipase A2 group IVA.
   
 
 0.851
gpx7
Glutathione peroxidase 7.
     
 0.849
ENSCHAP00000027818
Zgc:92162.
     
 0.839
pla2g12a
Phospholipase A2 group XIIA.
    
  0.788
ENSCHAP00000031691
annotation not available
  
  
 
0.784
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.