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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011327Striatin, calmodulin binding protein 4. (764 aa)    
Predicted Functional Partners:
ENSCHAP00000020088
Striatin interacting protein 1.
    
 0.937
ENSCHAP00000007350
annotation not available
    
 0.935
LOC105895368
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform.
   
 0.900
LOC105903801
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
   
 0.900
ENSCHAP00000029062
CTTNBP2 N-terminal like a.
   
 0.888
rnf8
Ring finger protein 8.
    
 0.887
ENSCHAP00000014691
CTTNBP2 N-terminal like b.
   
 0.884
ENSCHAP00000026189
FGFR1 oncogene partner 2.
    
 0.878
sike1
Suppressor of IKBKE 1.
    
 0.878
ENSCHAP00000026851
Programmed cell death 10b.
    
 0.873
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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