STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011378annotation not available (227 aa)    
Predicted Functional Partners:
syne3
Spectrin repeat containing nuclear envelope family member 3.
    
 0.749
chp1
Calcineurin like EF-hand protein 1.
    
  0.695
LOC105892977
Nesprin-3-like.
    
 0.688
ENSCHAP00000054563
Inositol 1,4,5-trisphosphate receptor, type 2.
    
 0.682
ENSCHAP00000055087
Inositol 1,4,5-trisphosphate receptor, type 1b.
    
 0.682
ENSCHAP00000055659
Inositol 1,4,5-trisphosphate receptor, type 3.
    
 0.682
ENSCHAP00000062740
Inositol 1,4,5-trisphosphate receptor, type 1a.
    
 0.682
ENSCHAP00000029637
annotation not available
     
0.668
sox18
SRY-box transcription factor 18.
   
 0.634
ENSCHAP00000001294
annotation not available
    
 0.630
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.