STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011380Brevican. (1494 aa)    
Predicted Functional Partners:
ADAMTS5
ADAM metallopeptidase with thrombospondin type 1 motif 5.
     
 0.908
ENSCHAP00000046324
Versican b.
  
 
0.877
ENSCHAP00000027714
Aggrecan b.
     
0.839
ENSCHAP00000029990
Aggrecan a.
     
0.839
tnr
Tenascin R.
   
 0.788
ENSCHAP00000062024
Agrin.
     
 0.785
ENSCHAP00000003156
annotation not available
   
 0.780
ENSCHAP00000008564
Zmp:0000000846.
   
 0.780
ENSCHAP00000053830
Tenascin N.
    
  0.770
ENSCHAP00000025158
Neurocan b.
   
0.763
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.