STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011386Serpin peptidase inhibitor, clade D (heparin cofactor), member 1. (503 aa)    
Predicted Functional Partners:
ENSCHAP00000017116
Fibrinogen alpha chain.
   
 0.933
ENSCHAP00000018193
Serpin peptidase inhibitor, clade C (antithrombin), member 1.
  
 
0.890
ENSCHAP00000035123
Protein C (inactivator of coagulation factors Va and VIIIa), a.
  
 0.818
ENSCHAP00000013823
annotation not available
  
 0.800
ENSCHAP00000000459
Zinc finger protein 408.
    
  0.782
vtn
Vitronectin.
   
 0.781
LOC105896257
Vitronectin-like.
   
 0.781
LOC105905489
Protein Z-dependent protease inhibitor-like.
  
 
0.755
ENSCHAP00000005881
Coagulation factor VII.
  
 0.706
agxt
Alanine--glyoxylate and serine--pyruvate aminotransferase.
   
    0.706
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.