Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSCHAP00000011389Switching B cell complex subunit SWAP70b. (440 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.700
ENSCHAP00000009160
RAN binding protein 2.
    
 0.651
eef1g
Eukaryotic translation elongation factor 1 gamma.
    
 0.604
ENSCHAP00000005866
CD79a molecule, immunoglobulin-associated alpha.
      
 0.601
ENSCHAP00000034369
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.508
ENSCHAP00000004284
Retinoblastoma binding protein 5.
    
 0.507
ENSCHAP00000018026
annotation not available
    
  0.497
LOC105906845
Cell division control protein 42 homolog.
    
  0.497
LOC105892187
Ras-related C3 botulinum toxin substrate 2.
   
  0.495
LOC105899959
Ras-related C3 botulinum toxin substrate 3.
   
  0.495
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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