STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011416Synaptosome associated protein 29. (265 aa)    
Predicted Functional Partners:
ENSCHAP00000001280
Syntaxin 17.
    
 0.999
vamp7
Vesicle associated membrane protein 7.
    
 0.996
ENSCHAP00000019279
Syntaxin 16.
    
 0.994
ENSCHAP00000015866
Vesicle-associated membrane protein 8 (endobrevin).
   
 0.993
ENSCHAP00000015878
Vesicle-associated membrane protein 8 (endobrevin).
   
 0.993
ENSCHAP00000010311
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.987
stx8
Syntaxin 8.
    
 0.986
ENSCHAP00000018246
Syntaxin 6.
    
 0.985
ENSCHAP00000030155
Syntaxin 10.
    
 0.985
stx18
Syntaxin 18.
    
 0.981
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.