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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP000000114245'-nucleotidase, cytosolic IAb. (407 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.953
ENSCHAP00000020641
Hypoxanthine phosphoribosyltransferase 1.
   
  0.882
ampd1
Adenosine monophosphate deaminase 1.
  
 
 0.867
ENSCHAP00000018625
Si:dkey-145c18.3.
   
  0.866
ENSCHAP00000058799
Nicotinamide phosphoribosyltransferase b.
   
  0.866
ENSCHAP00000037233
dCTP pyrophosphatase 1.
    
  0.864
ENSCHAP00000036655
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
  0.862
ENSCHAP00000033395
annotation not available
  
  
 
0.859
ENSCHAP00000016121
Nicotinate phosphoribosyltransferase.
  
 0.857
ENSCHAP00000042109
Ectonucleoside triphosphate diphosphohydrolase 6.
    
 0.852
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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