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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011459Mitochondrial ribosomal protein L35. (183 aa)    
Predicted Functional Partners:
ENSCHAP00000025749
Mitochondrial ribosomal protein L15.
   
   0.992
mrpl13
Mitochondrial ribosomal protein L13.
   
 
 0.986
mrps14
Mitochondrial ribosomal protein S14.
   
   0.986
mrpl20
Mitochondrial ribosomal protein L20.
   
 
 0.984
ENSCHAP00000023178
Mitochondrial ribosomal protein L51.
   
 
 0.983
ENSCHAP00000002735
Mitochondrial ribosomal protein L30.
   
 
 0.975
ENSCHAP00000050120
Mitochondrial ribosomal protein L9.
   
   0.975
ENSCHAP00000000372
Mitochondrial ribosomal protein L12.
   
 
 0.973
MRPL49
Mitochondrial ribosomal protein L49.
   
   0.971
mrps11
Mitochondrial ribosomal protein S11.
   
 
 0.970
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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