close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011466Deoxyhypusine synthase. (390 aa)    
Predicted Functional Partners:
LOC105908511
Eukaryotic translation initiation factor 5A-1-like.
   
 0.976
eif5a2
Eukaryotic translation initiation factor 5A2.
   
 0.971
eif5a
Eukaryotic translation initiation factor 5A.
   
 0.971
ENSCHAP00000058724
annotation not available
   
 0.971
farsa
phenylalanyl-tRNA synthetase subunit alpha.
   
  
 0.784
ENSCHAP00000010187
annotation not available
  
  
 0.753
polr1a
RNA polymerase I subunit A.
   
    0.742
ENSCHAP00000026988
glutamyl-prolyl-tRNA synthetase 1.
   
  
 0.712
rpl9
Ribosomal protein L9.
   
   0.664
ENSCHAP00000050616
SPO11 initiator of meiotic double stranded breaks.
     
 0.645
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.