STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arl14epADP ribosylation factor like GTPase 14 effector protein. (221 aa)    
Predicted Functional Partners:
ENSCHAP00000003882
annotation not available
    
 
 0.895
ENSCHAP00000011511
SET domain bifurcated histone lysine methyltransferase 1b.
    
 
 0.895
ENSCHAP00000030138
SET domain bifurcated histone lysine methyltransferase 1a.
    
 
 0.895
ENSCHAP00000011965
annotation not available
    
 
 0.834
LOC105898702
Uncharacterized LOC105898702.
    
 
 0.834
ENSCHAP00000036015
Activating transcription factor 7 interacting protein.
    
 
 0.834
ENSCHAP00000054471
annotation not available
    
 
 0.824
med21
Mediator complex subunit 21.
   
    0.621
KIF21A
Kinesin family member 21A.
   
  
 0.575
suox
Sulfite oxidase.
      
 0.572
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.