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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhx33DEAH-box helicase 33. (698 aa)    
Predicted Functional Partners:
ENSCHAP00000051587
WD repeat domain 36.
   
 0.980
ENSCHAP00000008762
annotation not available
   
 0.978
ENSCHAP00000049225
XPA binding protein 2.
   
 0.978
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 0.977
ENSCHAP00000025604
Crooked neck pre-mRNA splicing factor 1.
   
 0.977
cdc40
Cell division cycle 40.
   
 0.977
eftud2
Elongation factor Tu GTP binding domain containing 2.
   
 0.976
bysl
Bystin like.
   
 0.976
ENSCHAP00000011153
Eukaryotic translation initiation factor 4A3.
  
 0.975
dhx15
DEAH-box helicase 15.
  
0.975
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.