STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011492Hyaluronan and proteoglycan link protein 2. (337 aa)    
Predicted Functional Partners:
ENSCHAP00000036670
Versican a.
 
    
 0.904
ENSCHAP00000039731
Carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7.
      
 0.526
nipal4
NIPA like domain containing 4.
      
 0.520
ENSCHAP00000024291
Leucine rich repeat containing 7.
      
 0.426
ENSCHAP00000023876
Protein tyrosine phosphatase receptor type Z1b.
      
 0.410
ENSCHAP00000034164
Zgc:193541.
      
 0.406
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.