STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011503Lysine (K)-specific demethylase 2Ab. (1210 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase-associated protein 1-like.
   
 0.997
ENSCHAP00000052411
S-phase kinase-associated protein 1.
   
 0.997
RING1
Ring finger protein 1.
    
 0.994
rnf2
Ring finger protein 2.
    
 0.994
ENSCHAP00000049866
RING1 and YY1 binding protein a.
    
 0.989
ENSCHAP00000054469
YY1 associated factor 2.
    
 0.989
ENSCHAP00000056734
RING1 and YY1 binding protein b.
    
 0.989
ENSCHAP00000025068
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.964
ENSCHAP00000030235
SET domain containing 7, histone lysine methyltransferase.
   
 0.964
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.964
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.