STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105890736Serine/threonine-protein kinase 17A-like. (364 aa)    
Predicted Functional Partners:
ENSCHAP00000000237
annotation not available
 
  
   0.895
ENSCHAP00000000221
annotation not available
 
  
   0.812
ENSCHAP00000055562
annotation not available
 
  
   0.808
ENSCHAP00000000396
annotation not available
 
  
   0.804
ENSCHAP00000000355
annotation not available
 
  
   0.745
ENSCHAP00000000246
annotation not available
 
  
   0.694
pla2g4a
Phospholipase A2 group IVA.
    
 0.596
KALRN
Kalirin RhoGEF kinase.
 
  
   0.572
ripk4
Receptor interacting serine/threonine kinase 4.
    
0.568
ENSCHAP00000056468
Mitogen-activated protein kinase 12a.
  
 
0.522
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.