STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105894268Suppressor of cytokine signaling 2-like. (255 aa)    
Predicted Functional Partners:
ENSCHAP00000032150
Insulin receptor b.
    
 0.867
ENSCHAP00000051509
Insulin receptor a.
    
 0.867
cul5
Cullin 5.
   
 0.815
ENSCHAP00000048980
annotation not available
    
 0.791
LOC105900538
Transcription elongation factor B polypeptide 1-like.
    
 0.791
ENSCHAP00000000038
Elongin B.
    
 0.749
elob
Elongin B.
    
 0.749
ENSCHAP00000027842
Insulin-like growth factor 1b receptor.
    
 0.744
ENSCHAP00000052151
Insulin-like growth factor 1a receptor.
    
 0.744
ENSCHAP00000013182
Leptin receptor.
    
 0.632
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.