asb5 protein (Clupea harengus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

asb5

Ankyrin repeat and SOCS box containing 5. (329 aa)

Predicted Functional Partners:

cul5

0.796

ENSCHAP00000048980

0.769

LOC105900538

0.769

LOC105892544

0.760

leo1

0.734

ENSCHAP00000000038

0.727

elob

0.727

ENSCHAP00000007825

0.689

ENSCHAP00000029762

0.688

ENSCHAP00000028527

0.687

Your Current Organism:

Clupea harengus

NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCHAP00000000038	ENSCHAP00000007825	ENSCHAP00000000038	ENSCHAP00000007825	Elongin B.	NEDD8 ubiquitin like modifier, like.	0.973
ENSCHAP00000000038	ENSCHAP00000028527	ENSCHAP00000000038	ENSCHAP00000028527	Elongin B.	Copper metabolism (Murr1) domain containing 1.	0.819
ENSCHAP00000000038	ENSCHAP00000048980	ENSCHAP00000000038	ENSCHAP00000048980	Elongin B.	annotation not available	0.980
ENSCHAP00000000038	LOC105900538	ENSCHAP00000000038	ENSCHAP00000059950	Elongin B.	Transcription elongation factor B polypeptide 1-like.	0.980
ENSCHAP00000000038	asb5	ENSCHAP00000000038	ENSCHAP00000011702	Elongin B.	Ankyrin repeat and SOCS box containing 5.	0.727
ENSCHAP00000000038	cul5	ENSCHAP00000000038	ENSCHAP00000010468	Elongin B.	Cullin 5.	0.993
ENSCHAP00000000038	leo1	ENSCHAP00000000038	ENSCHAP00000004560	Elongin B.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.983
ENSCHAP00000007825	ENSCHAP00000000038	ENSCHAP00000007825	ENSCHAP00000000038	NEDD8 ubiquitin like modifier, like.	Elongin B.	0.973
ENSCHAP00000007825	ENSCHAP00000028527	ENSCHAP00000007825	ENSCHAP00000028527	NEDD8 ubiquitin like modifier, like.	Copper metabolism (Murr1) domain containing 1.	0.703
ENSCHAP00000007825	ENSCHAP00000029762	ENSCHAP00000007825	ENSCHAP00000029762	NEDD8 ubiquitin like modifier, like.	COMM domain containing 8.	0.696
ENSCHAP00000007825	ENSCHAP00000048980	ENSCHAP00000007825	ENSCHAP00000048980	NEDD8 ubiquitin like modifier, like.	annotation not available	0.966
ENSCHAP00000007825	LOC105892544	ENSCHAP00000007825	ENSCHAP00000032311	NEDD8 ubiquitin like modifier, like.	NF-kappa-B inhibitor alpha-like.	0.424
ENSCHAP00000007825	LOC105900538	ENSCHAP00000007825	ENSCHAP00000059950	NEDD8 ubiquitin like modifier, like.	Transcription elongation factor B polypeptide 1-like.	0.966
ENSCHAP00000007825	asb5	ENSCHAP00000007825	ENSCHAP00000011702	NEDD8 ubiquitin like modifier, like.	Ankyrin repeat and SOCS box containing 5.	0.689
ENSCHAP00000007825	cul5	ENSCHAP00000007825	ENSCHAP00000010468	NEDD8 ubiquitin like modifier, like.	Cullin 5.	0.994
ENSCHAP00000007825	elob	ENSCHAP00000007825	ENSCHAP00000006691	NEDD8 ubiquitin like modifier, like.	Elongin B.	0.973
ENSCHAP00000007825	leo1	ENSCHAP00000007825	ENSCHAP00000004560	NEDD8 ubiquitin like modifier, like.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.658
ENSCHAP00000028527	ENSCHAP00000000038	ENSCHAP00000028527	ENSCHAP00000000038	Copper metabolism (Murr1) domain containing 1.	Elongin B.	0.819
ENSCHAP00000028527	ENSCHAP00000007825	ENSCHAP00000028527	ENSCHAP00000007825	Copper metabolism (Murr1) domain containing 1.	NEDD8 ubiquitin like modifier, like.	0.703
ENSCHAP00000028527	ENSCHAP00000029762	ENSCHAP00000028527	ENSCHAP00000029762	Copper metabolism (Murr1) domain containing 1.	COMM domain containing 8.	0.958