STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000011745Immediate early response 3 interacting protein 1. (97 aa)    
Predicted Functional Partners:
yipf5
Yip1 domain family member 5.
   
 
 0.604
LOC105899655
Protein YIPF5-like.
   
 
 0.604
tmem167b
Transmembrane protein 167B.
   
   0.590
mrps21
Mitochondrial ribosomal protein S21.
   
    0.586
yif1a
Yip1 interacting factor homolog A, membrane trafficking protein.
    
 
 0.473
ENSCHAP00000046946
Yip1 interacting factor homolog B (S. cerevisiae).
    
 
 0.473
polr2l
RNA polymerase II subunit L.
   
    0.422
yipf6
Yip1 domain family member 6.
      
 0.418
rabac1
Rab acceptor 1.
      
 0.404
ENSCHAP00000037867
Transmembrane protein 234.
   
    0.402
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.