close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105910103CTP synthase 1-like. (635 aa)    
Predicted Functional Partners:
gmps
Guanine monophosphate synthase.
  
 0.958
ENSCHAP00000026988
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.955
rpl9
Ribosomal protein L9.
   
 
 0.922
dars2
aspartyl-tRNA synthetase 2, mitochondrial.
  
 
 0.921
ola1
Obg like ATPase 1.
  
 
 0.912
rpl23a
Ribosomal protein L23a.
   
 
 0.907
polr1a
RNA polymerase I subunit A.
   
 
 0.907
rpl11
Ribosomal protein L11.
   
 
 0.905
ENSCHAP00000049610
annotation not available
  
 
 0.901
ENSCHAP00000058691
NME/NM23 family member 8.
  
 
 0.901
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.